Disease: Lupus Erythematosus, Systemic
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs3819024
IL17A
0.701 0.560 6 52185988 upstream gene variant A/G snv 0.34 17
rs4728142 0.732 0.320 7 128933913 upstream gene variant G/A snv 0.38 18
rs5742909
CTLA4
0.614 0.680 2 203867624 upstream gene variant C/T snv 6.7E-02 40
rs5754467
CCDC116 ; YDJC
0.851 0.160 22 21630805 upstream gene variant A/G;T snv 4
rs6478109
TNFSF15
0.752 0.320 9 114806486 upstream gene variant A/G snv 0.74 12
rs6679677
PHTF1
0.653 0.320 1 113761186 upstream gene variant C/A snv 6.7E-02 26
rs7528684
FCRL3
0.752 0.560 1 157701026 upstream gene variant A/G snv 0.57 13
rs7745656 0.882 0.200 6 32713193 upstream gene variant G/T snv 0.29 3
rs7848647
TNFSF15
0.732 0.320 9 114806766 upstream gene variant T/C snv 0.74 13
rs7929541 0.851 0.160 11 633689 upstream gene variant T/C snv 0.34 4
rs8193036
IL17A
0.689 0.600 6 52185695 upstream gene variant C/T snv 0.72 21
rs8193037
IL17A
0.752 0.320 6 52186311 upstream gene variant G/A;T snv 12
rs9275572 0.724 0.360 6 32711222 upstream gene variant A/G;T snv 15
rs2228570
VDR
0.521 0.760 12 47879112 start lost A/C;G;T snv 0.63 99
rs535586
EHMT2 ; CYP21A2
0.882 0.160 6 31892560 splice region variant T/A;C snv 0.77 3
rs1131691014
TP53
0.439 0.800 17 7676154 frameshift variant -/C ins 214
rs2910164
MIR3142HG ; MIR146A
0.447 0.880 5 160485411 mature miRNA variant C/G snv 0.71; 4.1E-06 0.70 193
rs3746444
MIR499A ; MIR499B ; MYH7B ; LOC107985393
0.514 0.760 20 34990448 mature miRNA variant A/G snv 0.20 0.19 105
rs1063320
HLA-G
0.752 0.360 6 29830972 3 prime UTR variant C/G;T snv 12
rs10889677
IL23R
0.627 0.720 1 67259437 3 prime UTR variant C/A snv 0.27 40
rs10954213
IRF5
0.752 0.200 7 128949373 3 prime UTR variant G/A snv 0.58 11
rs10954214
IRF5
0.851 0.160 7 128949579 3 prime UTR variant C/T snv 0.64 4
rs12537
MTMR3 ; HORMAD2-AS1
0.827 0.280 22 30027471 3 prime UTR variant C/T snv 0.40 5
rs13389408
STAT4
0.851 0.160 2 191068557 3 prime UTR variant T/C snv 7.4E-02 4
rs2280714
TNPO3
0.752 0.440 7 128954671 3 prime UTR variant C/T snv 0.64 10